| Allison Creek | 20.6 | 21 |
| Ashepoo River | 55.6 | 56 |
| Ashley River | 55 | 55 |
| Bear Creek | 15.5 | 16 |
| Bear Island Creek | 8.8 | 28 |
| Beaufort River | 17 | 17 |
| Beaver Creek | 15.4 | 15 |
| Beaverdam Creek (Saluda River tributary) | 15 | 15 |
| Beaverdam Creek (Turkey Creek (Stevens Creek tributary)) | 21.8 | 22 |
| Beech Creek | 32.4 | 32 |
| Big Cedar Creek | 24.4 | 37 |
| Big Creek | 16 | 16 |
| Big Generostee Creek | 18.8 | 19 |
| Big Pine Tree Creek | 20.4 | 20 |
| Big Swamp Branch | 15.6 | 16 |
| Big Wateree Creek | 24.4 | 24 |
| Black Creek (Combahee River tributary) | 15.4 | 15 |
| Black Creek (Edisto River - North Fork tributary) | 22.2 | 22 |
| Black Creek (Great Pee Dee River tributary) | 105.6 | 142 |
| Black Mingo Creek | 26 | 26 |
| Black River | 156.8 | 357 |
| Broad River (Atlantic Ocean tributary) | 25.3 | 117 |
| Broad River (Congaree River tributary) | 106.4 | 989 |
| Brown Creek | 3.1 | 3 |
| Buck Creek | 13.4 | 13 |
| Buffalo Creek (Broad River tributary) | 6.7 | 7 |
| Bullock Creek | 25.7 | 46 |
| Bull Swamp | 15.1 | 15 |
| Bull Swamp Creek | 22.5 | 23 |
| Bush River | 39.2 | 39 |
| Calhoun Creek | 22.4 | 22 |
| Camp Creek | 17.8 | 18 |
| Camping Creek | 16.1 | 16 |
| Cane Creek (Catawba River tributary) | 22.7 | 38 |
| Cane Creek (Little River (Keowee River tributary)) | 20.6 | 21 |
| Cannons Creek | 19.4 | 19 |
| Catawba Creek | 0.6 | 1 |
| Catawba River | 62.1 | 325 |
| Cattle Creek | 20.4 | 20 |
| Caw Caw Swamp | 17.3 | 17 |
| Cedar Creek (Congaree River tributary) | 33.5 | 51 |
| Cedar Creek (Great Pee Dee River tributary) | 20 | 20 |
| Chattooga River (Tugaloo River tributary) | 40.4 | 40 |
| Chauga River | 31.3 | 31 |
| Cherokee Creek | 17.3 | 17 |
| Cheves Creek | 15 | 15 |
| Clark Fork | 20.4 | 20 |
| Clouds Creek | 27.1 | 27 |
| Colonels Creek | 20.1 | 20 |
| Combahee River | 55.7 | 254 |
| Coneross Creek | 31.2 | 31 |
| Congaree Creek | 28 | 28 |
| Congaree River | 52.4 | 1,771 |
| Cooper River | 29.9 | 95 |
| Cooper River - East Branch | 8.9 | 9 |
| Cooper River - West Branch | 14.4 | 14 |
| Coosawhatchie River | 59.3 | 74 |
| Coosaw River | 15.7 | 16 |
| Cow Castle Creek | 19.6 | 20 |
| Crane Creek | 16.4 | 16 |
| Crooked Creek (Great Pee Dee River tributary) | 26.2 | 26 |
| Crowders Creek | 11.7 | 12 |
| Cuffytown Creek | 27.5 | 28 |
| Dean Swamp Creek | 21.4 | 21 |
| Deep Creek (Seneca River tributary) | 2.3 | 53 |
| Deep Creek (Thompson Creek tributary) | 15.6 | 16 |
| Douglas Swamp | 20.8 | 21 |
| Duncan Creek | 34.1 | 34 |
| Dutchman Creek | 17.5 | 18 |
| Dutchmans Creek | 15.8 | 16 |
| Eastatoe Creek | 17.3 | 17 |
| Edisto River | 101.3 | 586 |
| Edisto River - North Fork | 96.5 | 159 |
| Edisto River - South Fork | 108.7 | 183 |
| Eighteenmile Creek | 26.2 | 26 |
| Enoree River | 109.4 | 168 |
| Fairforest Creek | 51.4 | 51 |
| Fishburne Creek | 19.3 | 19 |
| Fishing Creek | 57 | 76 |
| Fishing Creek - South Fork | 18.8 | 19 |
| Flat Creek | 17.4 | 17 |
| Four Hole Swamp | 62.8 | 82 |
| Fourmile Branch | 16.1 | 16 |
| Gills Creek | 20.4 | 20 |
| Goodland Creek | 15.7 | 16 |
| Goose Creek | 16.5 | 17 |
| Grannies Quarter Creek | 18.6 | 19 |
| Great Pee Dee River | 169.8 | 1,425 |
| Green Swamp | 15.6 | 16 |
| Gum Swamp Branch | 15.4 | 15 |
| Gum Swamp Creek | 4.9 | 5 |
| Halfway Swamp Creek | 18 | 18 |
| Hard Labor Creek | 28.6 | 29 |
| Hellers Creek | 16.7 | 17 |
| Hencoop Creek | 16.8 | 17 |
| High Hill Creek | 18.9 | 19 |
| Hollow Creek | 19.1 | 19 |
| Horn Creek | 20.4 | 20 |
| Horse Creek | 19.7 | 34 |
| Horsepasture River | 1.9 | 2 |
| Indian Creek | 24.4 | 24 |
| Indian Field Swamp | 19.6 | 20 |
| Jeffries Creek | 41.6 | 60 |
| Juniper Creek | 18.3 | 18 |
| Keowee River | 24.9 | 108 |
| Kings Creek | 16.2 | 16 |
| Kingston Lake | 20.5 | 21 |
| Lake Swamp (Lynches River tributary) | 24.7 | 25 |
| Lake Swamp (Sparrow Swamp tributary) | 28.1 | 28 |
| Lawsons Fork Creek | 31.1 | 31 |
| Leith Creek | 1.4 | 1 |
| Lemon Creek | 19.5 | 20 |
| Little Cedar Creek | 12.5 | 13 |
| Little Generostee Creek | 13.9 | 14 |
| Little Horse Creek | 14.2 | 14 |
| Little Lynches River | 37 | 37 |
| Little Pee Dee River | 126.7 | 169 |
| Little River (Broad River (Congaree River tributary)) | 37.3 | 51 |
| Little River (Keowee River tributary) | 27 | 48 |
| Little River (Saluda River tributary) | 41.7 | 42 |
| Little River (Savannah River tributary) | 62 | 129 |
| Little River - West Fork (Broad River (Congaree River tributary)) | 13.4 | 13 |
| Little Rocky Creek | 17.7 | 18 |
| Little Salkehatchie River | 61.5 | 81 |
| Little Saluda River | 24.7 | 68 |
| Little Sandy River | 14.6 | 15 |
| Little Stevens Creek | 10.8 | 26 |
| Little Sugar Creek | 0.6 | 1 |
| Long Cane Creek | 44.9 | 45 |
| Lower Three Runs | 29.9 | 30 |
| Lumber River | 17.3 | 17 |
| Lynches River | 179.6 | 343 |
| Marks Creek | 3.9 | 4 |
| McAlpine Creek | 2.1 | 2 |
| Middle Saluda River | 19.2 | 19 |
| Middle Swamp | 18 | 18 |
| Middle Tyger River | 39.5 | 40 |
| Mill Creek | 25.7 | 26 |
| Mulyn Creek | 7.4 | 23 |
| Naked Creek | 17.3 | 17 |
| New River | 31.5 | 32 |
| Ninety Six Creek | 15.4 | 15 |
| North Pacolet River | 17.8 | 18 |
| North Rabon Creek | 13.6 | 14 |
| North Saluda River | 28.3 | 28 |
| North Santee River | 17.9 | 34 |
| North Tyger River | 35.7 | 75 |
| Oolenoy River | 15.1 | 15 |
| Pacolet River | 50.4 | 140 |
| Pee Dee River | 7.4 | 14 |
| Pocotaligo River | 32.5 | 69 |
| Polk Swamp | 20.6 | 40 |
| Pudding Swamp | 28.3 | 49 |
| Rabon Creek | 13.6 | 46 |
| Rantowles Creek | 5.9 | 25 |
| Reedy Creek | 15.3 | 15 |
| Reedy River | 75.5 | 122 |
| Rocky Bluff Swamp | 20 | 20 |
| Rocky Creek | 35.1 | 53 |
| Rocky River | 50.1 | 84 |
| Salkehatchie River | 59.8 | 86 |
| Saluda River | 157.8 | 605 |
| Sammy Swamp | 21.1 | 21 |
| Sandy River | 28.3 | 43 |
| Santee River | 130.8 | 2,615 |
| Savannah River | 293.8 | 1,295 |
| Sawneys Creek | 21.6 | 22 |
| Scape Ore Swamp | 35.9 | 56 |
| Seneca River | 21 | 264 |
| Shaw Creek | 37 | 37 |
| Shoe Heel Creek | 3.1 | 3 |
| Six and Twenty Creek | 22.8 | 23 |
| Sixmile Creek | 8.8 | 9 |
| Sleepy Creek | 15.6 | 16 |
| South Edisto River | 19.4 | 605 |
| South Pacolet River | 27.5 | 28 |
| South Rabon Creek | 18.9 | 19 |
| South Saluda River | 33.5 | 68 |
| South Tyger River | 48.6 | 49 |
| Sparrow Swamp | 40.4 | 69 |
| Spears Creek | 27.3 | 27 |
| Stevens Creek | 38.8 | 216 |
| Stono River | 26.9 | 52 |
| Sugar Creek | 13.3 | 16 |
| Swift Creek (Black Creek (Great Pee Dee River tributary)) | 17.2 | 17 |
| Swift Creek (Wateree River tributary) | 20.9 | 21 |
| Thicketty Creek | 36.1 | 36 |
| Thompson Creek | 50.9 | 85 |
| Three and Twenty Creek | 27.9 | 28 |
| Tinker Creek | 15.2 | 15 |
| Toby Creek | 15 | 15 |
| Toms Creek | 17.5 | 18 |
| Toxaway River | 9.7 | 19 |
| Tugaloo River | 49.9 | 122 |
| Tulifiny River | 14.9 | 15 |
| Turkey Creek (Broad River (Congaree River tributary)) | 28.8 | 29 |
| Turkey Creek (Saluda River tributary) | 18.8 | 19 |
| Turkey Creek (Stevens Creek tributary) | 37.9 | 86 |
| Twelvemile Creek | 15.2 | 15 |
| Twelvemile Creek (Catawba River tributary) | 11.7 | 21 |
| Twelvemile Creek (Seneca River tributary) | 24.3 | 24 |
| Twentyfive Mile Creek | 28.6 | 29 |
| Tyger River | 47.2 | 240 |
| Upper Three Runs | 30.1 | 45 |
| Waccamaw River | 97.4 | 118 |
| Wadmacon Creek | 16.4 | 16 |
| Wambaw Creek | 16.1 | 16 |
| Wando River | 25 | 25 |
| Wateree River | 93.3 | 679 |
| Waxhaw Creek | 9 | 9 |
| Whippy Swamp | 11.1 | 11 |
| Whitewater River | 7 | 7 |
| Wilson Creek | 17 | 17 |
