| Adobe Wall Creek | 16 | 16 |
| Alkali Creek (Bennie Peer Creek tributary) | 14.8 | 15 |
| Alkali Creek (Grand River - North Fork tributary) | 45.6 | 144 |
| Alkali Creek (Missouri River tributary) | 14.8 | 15 |
| Andrews Creek | 22.2 | 22 |
| Antelope Creek | 67.2 | 67 |
| Antelope Creek (Charbonneau Creek tributary) | 25.4 | 25 |
| Antelope Creek (Heart River tributary) | 67.9 | 68 |
| Antelope Creek (Knife River tributary) | 22.7 | 48 |
| Antelope Creek (Missouri River tributary) | 21.4 | 44 |
| Antelope Creek - South Branch (Wild Rice River tributary) | 25.3 | 25 |
| Antelope Creek - West Branch (Knife River tributary) | 24.9 | 25 |
| Antelope Creek (Wild Rice River tributary) | 45 | 70 |
| Apple Creek | 64.9 | 183 |
| Apple Creek - East Branch | 42.8 | 43 |
| Apple Creek - West Branch | 42.2 | 42 |
| Ash Creek | 21.8 | 22 |
| Bacon Creek | 24.2 | 24 |
| Badger Creek | 30.2 | 30 |
| Baldhill Creek | 71.5 | 72 |
| Battle Creek | 25.8 | 26 |
| Bear Creek (James River tributary) | 56 | 56 |
| Bear Creek (Little Missouri River tributary) | 13.9 | 14 |
| Bear Creek (Little Missouri River tributary) | 17.3 | 17 |
| Bear Den Creek | 40.2 | 40 |
| Beaver Creek (Buffalo Creek (Heart River tributary)) | 15.1 | 15 |
| Beaver Creek (Goose River tributary) | 64.2 | 64 |
| Beaver Creek (Heart River tributary) | 24.3 | 24 |
| Beaver Creek (Heart River tributary) | 32.6 | 33 |
| Beaver Creek (James River tributary) | 45 | 76 |
| Beaver Creek (Little Missouri River tributary) | 73.5 | 159 |
| Beaver Creek (Missouri River tributary) | 39.1 | 39 |
| Beaver Creek (Missouri River tributary) | 122 | 249 |
| Beaver Creek (Missouri River tributary) | 17.1 | 17 |
| Beaver Creek - South Branch (Missouri River tributary) | 61.6 | 62 |
| Beaver Holes Creek | 16.3 | 16 |
| Beicegel Creek | 47.6 | 48 |
| Bennett Creek | 23.2 | 23 |
| Bennie Peer Creek | 44.8 | 94 |
| Big Muddy Creek | 84.2 | 210 |
| Blackfoot Creek | 0.9 | 19 |
| Blacktail Creek (Little Missouri River tributary) | 27.4 | 57 |
| Blacktail Creek (Little Muddy River tributary) | 23.1 | 23 |
| Bois de Sioux River | 28.3 | 28 |
| Bone Hill Creek | 43.7 | 44 |
| Boundary Creek | 43.6 | 44 |
| Boxelder Creek (Cannonball River tributary) | 22.3 | 22 |
| Boxelder Creek (Little Missouri River tributary) | 6.4 | 15 |
| Boyce Creek | 19.7 | 20 |
| Brady Creek | 25.9 | 26 |
| Branch Knife River | 58.6 | 59 |
| Brush Creek | 25.1 | 25 |
| Brushy Creek | 24.9 | 25 |
| Buffalo Creek (Beaver Creek (James River tributary)) | 30.6 | 31 |
| Buffalo Creek (Grand River - North Fork tributary) | 61.1 | 61 |
| Buffalo Creek (Heart River tributary) | 26.1 | 41 |
| Buffalo Creek (Little Beaver Creek tributary) | 2.8 | 3 |
| Buffalo Creek (Maple River (Sheyenne River tributary)) | 45.7 | 46 |
| Bull Creek | 23.5 | 24 |
| Bullion Creek | 52.1 | 52 |
| Bull Run Creek | 27 | 27 |
| Bummer Creek | 16.3 | 16 |
| Burnt Creek | 47.7 | 48 |
| Cannonball Creek | 16.5 | 23 |
| Cannonball River | 351.3 | 1,816 |
| Cantapeta Creek | 6.2 | 52 |
| Cantapeta Creek - North Branch | 23.5 | 24 |
| Cantapeta Creek - Northwest Branch | 22.2 | 22 |
| Cart Creek | 54.4 | 54 |
| Cash Creek | 15.5 | 16 |
| Cedar Creek | 296.8 | 754 |
| Cedar Creek - North Fork | 13.6 | 14 |
| Chanta Peta Creek | 56.9 | 57 |
| Chanta Peta Creek | 34.4 | 53 |
| Chanta Peta Creek - East Fork | 18.6 | 19 |
| Charbonneau Creek | 57.4 | 125 |
| Charbonneau Creek - West Branch | 21.8 | 22 |
| Charlie Bob Creek | 14.8 | 15 |
| Cheney Creek | 14.4 | 14 |
| Cherry Creek | 75.1 | 143 |
| Chilton Creek | 20.2 | 20 |
| Cinnamon Creek | 14.4 | 14 |
| Clarks Creek | 18.6 | 19 |
| Clear Creek (Beaver Creek (Missouri River tributary)) | 18.3 | 18 |
| Clear Creek (Tobacco Garden Creek tributary) | 28.6 | 29 |
| Coal Bank Creek | 41.3 | 41 |
| Coal Creek (Heart River tributary) | 18.9 | 19 |
| Coal Creek (Knife River tributary) | 15.9 | 16 |
| Cold Turkey Creek | 32.6 | 33 |
| Cole Creek | 38.7 | 39 |
| Coon Creek | 13.7 | 14 |
| Corral Creek (Jim Creek tributary) | 16.4 | 16 |
| Corral Creek (Little Beaver Creek tributary) | 5.1 | 5 |
| Corral Creek (Little Missouri River tributary) | 15.5 | 16 |
| Cottonwood Creek | 88.8 | 89 |
| Cow Creek | 36.1 | 36 |
| Coyote Creek (Knife River tributary) | 19.8 | 20 |
| Coyote Creek (Little Missouri River tributary) | 27.9 | 28 |
| Crooked Creek (Cedar Creek tributary) | 23.7 | 24 |
| Crooked Creek (Grand River - North Fork tributary) | 0.7 | 1 |
| Crooked Creek (Knife River tributary) | 63.8 | 64 |
| Crooked Creek (Wild Rice River tributary) | 30.4 | 30 |
| Crosby Creek | 14.8 | 45 |
| Crown Butte Creek | 15.3 | 15 |
| C S Creek | 6.8 | 7 |
| Cut Bank Creek (Deep River tributary) | 42.6 | 43 |
| Cut Bank Creek (Deep River tributary) | 89.2 | 107 |
| Dantz Creek | 19.6 | 20 |
| Davis Creek | 32.2 | 32 |
| Dayton Creek | 20.8 | 21 |
| Dead Colt Creek | 24.4 | 24 |
| Dead Horse Creek | 15 | 15 |
| Deep Creek - East Fork (Little Missouri River tributary) | 26.7 | 27 |
| Deep Creek (Knife River tributary) | 42.4 | 42 |
| Deep Creek (Little Missouri River tributary) | 47.3 | 101 |
| Deep Creek - West Fork (Little Missouri River tributary) | 26.8 | 27 |
| Deep River | 21.3 | 267 |
| Deepwater Creek | 39 | 39 |
| Des Lacs River | 76.6 | 77 |
| Dogtooth Creek | 48 | 160 |
| Douglas Creek - East Branch | 22.6 | 23 |
| Douglas Creek - Middle Branch | 34.7 | 77 |
| Douglas Creek - West Branch | 19.8 | 20 |
| Duck Creek (Beaver Creek (Little Missouri River tributary)) | 6.5 | 7 |
| Duck Creek (Cedar Creek tributary) | 89.1 | 89 |
| Duck Creek (Heart River tributary) | 16.3 | 16 |
| Egg Creek | 54.5 | 55 |
| Eightmile Creek | 26.3 | 26 |
| Elk Creek (Beaver Creek (Little Missouri River tributary)) | 36 | 52 |
| Elk Creek - East Branch (Beaver Creek (Little Missouri River tributary)) | 15.7 | 16 |
| Elk Creek (Wild Rice River tributary) | 9.6 | 10 |
| Elm Creek | 33.3 | 33 |
| Elm River (James River tributary) | 32.9 | 182 |
| Elm River - North Branch (Red River of the North tributary) | 39.7 | 40 |
| Elm River (Red River of the North tributary) | 91.9 | 155 |
| Elm River - South Branch (Red River of the North tributary) | 23.2 | 23 |
| First Creek | 23.1 | 23 |
| Fivemile Creek | 21.3 | 21 |
| Flat Creek | 45.5 | 46 |
| Forest River | 81.1 | 178 |
| Forest River - Middle Branch | 35.9 | 36 |
| Forest River - North Branch | 35.8 | 36 |
| Forest River - South Branch | 25.5 | 26 |
| Fourmile Creek | 31.7 | 32 |
| Franks Creek | 27.3 | 27 |
| Garner Creek | 48.4 | 67 |
| Garner Creek - North Fork | 18.6 | 19 |
| Goodman Creek | 31 | 31 |
| Goose Creek | 14.3 | 14 |
| Goose River | 178 | 463 |
| Goose River - Middle Branch | 55 | 55 |
| Goose River - North Branch | 47.7 | 48 |
| Goose River - South Branch | 52 | 107 |
| Government Creek (Heart River tributary) | 40.9 | 64 |
| Government Creek (Little Missouri River tributary) | 22.3 | 22 |
| Grand River - North Fork | 74.2 | 343 |
| Green River | 98 | 182 |
| Green River - South Fork | 20 | 20 |
| Gumbo Creek | 14.9 | 15 |
| Hagel Creek | 20.8 | 21 |
| Hailstone Creek | 50.9 | 82 |
| Hanley Wash | 6.6 | 22 |
| Hans Creek | 17.9 | 18 |
| Hawk Creek | 24.3 | 24 |
| Hay Creek (Apple Creek tributary) | 16.5 | 17 |
| Hay Creek (Cedar Creek tributary) | 18.9 | 19 |
| Haymarsh Creek | 16.1 | 16 |
| Hazen Brook | 20.7 | 21 |
| Heart Butte Creek | 52.1 | 52 |
| Heart River | 290.8 | 1,249 |
| Heart River - South Branch | 35.5 | 59 |
| Horse Creek (Little Missouri River tributary) | 18 | 18 |
| Horse Creek (Little Missouri River tributary) | 16.3 | 16 |
| Horse Creek (Yellowstone River tributary) | 32.5 | 33 |
| Horsehead Creek | 25.2 | 25 |
| Indian Creek | 21.7 | 43 |
| Indian Creek (Little Missouri River tributary) | 16.6 | 17 |
| Iron Dog Creek | 2.3 | 2 |
| James River | 304.2 | 1,010 |
| Jim Creek | 32.5 | 49 |
| Joe Bush Creek | 18.3 | 18 |
| Johny Creek | 6.2 | 6 |
| Kelly Creek | 28.4 | 28 |
| Kinneman Creek | 17.6 | 18 |
| Knife River | 233.4 | 880 |
| Knutson Creek | 31.6 | 32 |
| La Belle Creek | 9 | 9 |
| Leaf on the Hill Creek | 29.5 | 30 |
| Lightning Creek | 38.4 | 38 |
| Little Antelope Creek | 22.7 | 23 |
| Little Beaver Creek | 36.3 | 36 |
| Little Beaver Creek (Beaver Creek (Little Missouri River tributary)) | 27.5 | 28 |
| Little Beaver Creek (Little Missouri River tributary) | 17.5 | 25 |
| Little Deep Creek | 95.5 | 96 |
| Little Goose River | 36.2 | 36 |
| Little Heart River | 43.2 | 65 |
| Little Heart River - Southeast Branch | 21.9 | 22 |
| Little Knife River | 33.5 | 34 |
| Little Knife River | 58.9 | 59 |
| Little Missouri River | 365.8 | 2,031 |
| Little Muddy Creek | 19 | 19 |
| Little Muddy River | 97.6 | 188 |
| Little Muddy River - East Fork | 30.9 | 31 |
| Little Pipestem Creek | 31.1 | 31 |
| Little South Pembina River | 55.3 | 55 |
| Livingston Creek | 15.9 | 16 |
| Lonesome Creek | 20.6 | 21 |
| Lone Tree Creek (Grand River - North Fork tributary) | 21.5 | 22 |
| Long Creek | 16.2 | 16 |
| Long Lake Creek | 63.2 | 110 |
| Long Lake Creek - West Branch | 22.7 | 23 |
| Louse Creek | 58.8 | 112 |
| Magpie Creek | 32.2 | 32 |
| Malnourie Creek | 14 | 14 |
| Maple Creek | 42 | 42 |
| Maple River (Elm River (James River tributary)) | 91.4 | 149 |
| Maple River (Sheyenne River tributary) | 197.9 | 300 |
| Maple River - South Branch (Sheyenne River tributary) | 17.7 | 18 |
| Maple River - South Fork (Elm River (James River tributary)) | 15.5 | 16 |
| Miller Creek | 22.5 | 23 |
| Minneapolis Flats Creek | 25.3 | 25 |
| Missouri River | 352.1 | 10,074 |
| Moccasin Creek | 34.8 | 35 |
| Morris Creek | 25.7 | 26 |
| Mud Creek | 26.4 | 43 |
| Muskrat Creek | 15.5 | 16 |
| North Cedar Creek | 37.3 | 37 |
| North Creek | 15.1 | 15 |
| Northfork Creek | 28.3 | 28 |
| North Fork Sheyenne River | 27.5 | 28 |
| Norwegian Creek | 26.1 | 26 |
| Oak Creek (Missouri River tributary) | 21.4 | 21 |
| Oak Creek (Souris River tributary) | 33 | 33 |
| Oak Creek (Willow Creek (Souris River tributary)) | 40.8 | 41 |
| Onemile Creek | 14.6 | 15 |
| One-O-One Creek | 14.3 | 14 |
| Otter Creek (Heart River tributary) | 19.1 | 19 |
| Otter Creek (Knife River tributary) | 46.9 | 47 |
| Otter Creek (Square Butte Creek tributary) | 22 | 22 |
| Ox Creek | 92.2 | 141 |
| Paddock Creek | 19.7 | 20 |
| Painted Woods Creek | 48.9 | 49 |
| Park River | 34.7 | 329 |
| Park River - Middle Branch | 72.9 | 211 |
| Park River - North Branch | 83.4 | 138 |
| Park River - South Branch | 83.7 | 84 |
| Paulsen Creek | 18.5 | 19 |
| Pembina River | 109.5 | 255 |
| Philbrick Creek | 36.3 | 52 |
| Pickerel Lake Creek | 18.5 | 19 |
| Pipestem Creek | 123.6 | 180 |
| Pitcairn Creek | 15.7 | 16 |
| Pitt Creek | 13.8 | 14 |
| Plum Creek (Cedar Creek tributary) | 16.2 | 16 |
| Plum Creek (Cedar Creek tributary) | 21.1 | 21 |
| Plum Creek (Heart River tributary) | 27.5 | 28 |
| Porcupine Creek | 74.5 | 75 |
| Ranch Creek | 15.5 | 16 |
| Random Creek | 17 | 17 |
| Red River of the North | 400 | 3,616 |
| Red Wing Creek | 28.2 | 28 |
| Rice Creek | 21.1 | 21 |
| Rock Creek (Grand River tributary) | 7.3 | 7 |
| Rocky Run | 51.9 | 52 |
| Roger Creek | 22.5 | 23 |
| Roosevelt Creek | 16.6 | 17 |
| Rough Creek | 14.2 | 14 |
| Rush River | 61.4 | 61 |
| Rush River - Lower Branch | 15.5 | 16 |
| Russian Spring Creek | 34.7 | 35 |
| Salt Water Coulee | 33.1 | 54 |
| Sand Creek (Beaver Creek (Missouri River tributary)) | 29.6 | 30 |
| Sand Creek (Little Missouri River tributary) | 37.2 | 60 |
| Sand Creek (Missouri River tributary) | 27.9 | 28 |
| Schaffner Creek | 13.7 | 14 |
| Sevenmile Creek | 22.9 | 23 |
| Sheep Creek | 28.5 | 29 |
| Sherk Creek | 13.5 | 14 |
| Sheyenne River | 589.7 | 1,147 |
| Shortfoot Creek | 25.4 | 25 |
| Silver Creek | 15.2 | 15 |
| Sims Creek | 15.1 | 31 |
| Sixmile Creek (Cannonball River tributary) | 25.6 | 26 |
| Sixmile Creek (Missouri River tributary) | 16.7 | 17 |
| Skull Creek | 21.7 | 22 |
| Skunk Creek | 14.6 | 15 |
| Smith Creek (Yellowstone River tributary) | 0.8 | 8 |
| Snake Creek (Cannonball River tributary) | 27.2 | 27 |
| Snake Creek (Mud Creek tributary) | 16.6 | 17 |
| Snake Creek (Willow Creek (Souris River tributary)) | 14.5 | 15 |
| Soda Creek (Boxelder Creek (Little Missouri River tributary)) | 8.4 | 8 |
| Souris River | 338.1 | 1,302 |
| South Cedar Creek | 16.7 | 17 |
| Spring Creek (Alkali Creek (Grand River - North Fork tributary)) | 51.4 | 98 |
| Spring Creek (Beaver Creek (Missouri River tributary)) | 17.7 | 18 |
| Spring Creek (Bennie Peer Creek tributary) | 20.3 | 20 |
| Spring Creek (Cannonball River tributary) | 20.5 | 21 |
| Spring Creek (Cannonball River tributary) | 22.8 | 23 |
| Spring Creek (Cherry Creek tributary) | 25.8 | 26 |
| Spring Creek (Goose River tributary) | 30.3 | 30 |
| Spring Creek (Government Creek (Heart River tributary)) | 22.7 | 23 |
| Spring Creek (Green River tributary) | 14.8 | 15 |
| Spring Creek (Green River tributary) | 14.4 | 14 |
| Spring Creek (Knife River tributary) | 123.5 | 169 |
| Spring Creek (Little Missouri River tributary) | 20.7 | 21 |
| Spring Creek (Little Missouri River tributary) | 17.9 | 18 |
| Spring Creek (Sheyenne River tributary) | 24.1 | 24 |
| Spring Creek (Souris River tributary) | 21.4 | 21 |
| Square Butte Creek | 74.4 | 117 |
| Squaw Creek (Little Missouri River tributary) | 34.9 | 35 |
| Squaw Creek (Little Missouri River tributary) | 19.9 | 20 |
| Stage Creek | 14.4 | 14 |
| Stink Creek | 0.5 | 3 |
| Stockyard Creek | 14.4 | 14 |
| Stone Creek | 39.7 | 40 |
| Stony Creek | 34.4 | 49 |
| Stray Creek | 16.3 | 16 |
| Sully Creek | 20.7 | 21 |
| Swan Creek | 38.2 | 38 |
| Sweetbriar Creek | 66 | 66 |
| Tepee Creek | 20.9 | 21 |
| Third Creek | 15.7 | 16 |
| Thirtymile Creek | 91.3 | 91 |
| Timber Creek (Cedar Creek tributary) | 57.2 | 57 |
| Timber Creek (Cedar Creek tributary) | 15.6 | 16 |
| Timber Creek (Missouri River tributary) | 44.5 | 45 |
| Tobacco Garden Creek | 60.6 | 89 |
| Tongue River | 90.4 | 90 |
| Turtle Creek (Cedar Creek tributary) | 17.4 | 17 |
| Turtle Creek (Missouri River tributary) | 45 | 45 |
| Turtle River | 74.9 | 199 |
| Turtle River - North Branch | 46.7 | 47 |
| Turtle River - South Branch | 23.6 | 24 |
| Wannagan Creek | 23.4 | 23 |
| West Cut Bank Creek | 18.2 | 18 |
| White Earth Creek | 29.6 | 30 |
| White Earth River | 88.5 | 137 |
| Whitetail Creek | 29.8 | 30 |
| Whitmore Creek | 20.4 | 20 |
| Wild Cow Creek | 14.7 | 15 |
| Wild Rice Creek | 9.9 | 10 |
| Wild Rice River | 251.4 | 422 |
| Williams Creek | 24.8 | 25 |
| Willow Creek (Knife River tributary) | 16.3 | 16 |
| Willow Creek (Souris River tributary) | 127 | 389 |
| Wilson Creek (Big Muddy Creek tributary) | 27.7 | 28 |
| Wilson Creek (Grand River - North Fork tributary) | 2.7 | 3 |
| Wintering River | 78.3 | 78 |
| Wolf Butte Creek | 15 | 15 |
| Wolf Creek | 48.8 | 49 |
| Yellowstone River | 17.5 | 291 |
