| Ackler Creek | 10.6 | 11 |
| Allegheny Creek | 11.1 | 11 |
| Amargosa River | 44.1 | 44 |
| Antelope Creek | 39.9 | 40 |
| Antelope Creek (Rock Creek tributary) | 39.9 | 52 |
| Badger Creek | 11.6 | 12 |
| Baker Creek | 16 | 16 |
| Bartlett Creek | 17.2 | 17 |
| Beaver Creek - East Fork | 20.7 | 21 |
| Beaver Creek (Humboldt River - North Fork tributary) | 4.4 | 54 |
| Beaver Creek (Maggie Creek tributary) | 12.8 | 13 |
| Beaver Creek (Owyhee River tributary) | 10.7 | 11 |
| Beaver Creek - West Fork | 28.9 | 29 |
| Big Cottonwood Creek | 38.9 | 50 |
| Big Creek | 19.8 | 20 |
| Big Pole Creek | 14 | 14 |
| Bishop Creek | 30.4 | 65 |
| Bluff Creek | 15.3 | 15 |
| Bodie Creek | 11.4 | 23 |
| Boone Creek | 11.4 | 11 |
| Boulder Creek (Humboldt River tributary) | 40.7 | 51 |
| Boulder Creek (Rock Spring Creek tributary) | 13 | 13 |
| Bruneau River | 58.9 | 227 |
| Buck Creek | 10.9 | 11 |
| Bull Creek | 37.2 | 52 |
| Burnt Canyon Creek | 10.2 | 10 |
| Burnt Creek | 19.9 | 20 |
| Butterfield Creek | 14.7 | 15 |
| Cain Creek | 18.1 | 29 |
| Calico Creek | 23.9 | 24 |
| Camp Creek | 18.9 | 19 |
| Camp Valley Creek | 17.8 | 18 |
| Canyon Creek | 22.1 | 22 |
| Carson River | 131.2 | 179 |
| Carson River - East Fork | 20.8 | 21 |
| Carson River - West Fork | 13.5 | 14 |
| Cat Creek | 4.6 | 5 |
| Cedar Creek | 10.6 | 11 |
| Cherry Creek | 8.9 | 9 |
| Chimney Creek (Little Humboldt River tributary) | 13.1 | 13 |
| Chimney Creek (Mitchell Creek tributary) | 12.2 | 12 |
| Circle Creek | 22 | 22 |
| Clear Creek | 35 | 35 |
| Clear Creek (Carson River tributary) | 13.8 | 14 |
| Clover Creek | 40.4 | 40 |
| Cloverdale Creek | 22.3 | 22 |
| Coal Mine Creek | 19.9 | 20 |
| Coils Creek | 35.5 | 36 |
| Colorado River | 146.1 | 521 |
| Columbet Creek | 6.7 | 7 |
| Cottonwood Creek (Cain Creek tributary) | 11.2 | 11 |
| Cottonwood Creek (Herrin Slough tributary) | 21.5 | 22 |
| Cottonwood Creek (Humboldt River - North Fork tributary) | 10.3 | 10 |
| Cottonwood Creek (Huntington Creek tributary) | 15.4 | 15 |
| Cottonwood Creek (Reese River tributary) | 10.6 | 11 |
| Cottonwood Creek (Salmon Falls Creek - South Fork tributary) | 18.9 | 19 |
| Cottonwood Creek (Salmon Falls Creek tributary) | 13.6 | 14 |
| Cow Creek | 12.4 | 12 |
| Coyote Creek | 13.2 | 13 |
| Coyote Wash | 54.6 | 55 |
| Currant Creek (Duckwater Creek tributary) | 23.9 | 24 |
| Currant Creek (T Creek tributary) | 11.6 | 12 |
| Dave Creek | 10.3 | 10 |
| Deep Creek (Owyhee River - South Fork tributary) | 32.5 | 33 |
| Deep Creek (Quinn River tributary) | 33.9 | 54 |
| Deer Creek | 3.4 | 3 |
| Denay Creek | 26 | 26 |
| Dixie Creek | 27.8 | 28 |
| Dorsey Creek (Jarbidge River tributary) | 6.4 | 6 |
| Dorsey Creek (Pie Creek tributary) | 25 | 52 |
| Duck Creek | 86 | 86 |
| Duckwater Creek | 53.8 | 129 |
| Dun Glen Creek | 18 | 30 |
| East Walker River | 68.5 | 107 |
| Foreman Creek | 15.2 | 26 |
| Fourmile Creek | 39.9 | 40 |
| Franklin River | 45.3 | 45 |
| Franktown Creek | 11 | 11 |
| Galena Creek | 11 | 11 |
| Gance Creek | 18 | 18 |
| Gleason Creek | 18.3 | 18 |
| Goose Creek | 39.6 | 99 |
| Hanks Creek | 17.3 | 17 |
| Happy Creek | 11.5 | 12 |
| Hardesty Creek | 2.9 | 3 |
| Henderson Creek | 34.7 | 54 |
| Herrin Slough | 33.2 | 55 |
| Horse Creek | 13.2 | 13 |
| Hot Creek | 6.1 | 18 |
| Hot Creek | 43.5 | 57 |
| Humboldt River | 474.4 | 3,131 |
| Humboldt River - North Fork | 103.5 | 315 |
| Humboldt River - South Fork | 39.3 | 303 |
| Huntington Creek | 63.6 | 158 |
| Hunts Creek | 41.6 | 54 |
| Indian Creek | 11.3 | 11 |
| Indian Creek (Huntington Creek tributary) | 10.2 | 21 |
| Indian Creek - North Fork (Huntington Creek tributary) | 10.4 | 10 |
| Ione Wash | 79.2 | 102 |
| Italian Creek | 16 | 16 |
| Jack Creek | 6.3 | 20 |
| Jackstone Creek | 10.7 | 11 |
| Jakes Creek | 13.1 | 26 |
| Jarbidge River | 17.8 | 80 |
| Jarbidge River - East Fork | 19.6 | 30 |
| Juniper Creek | 5 | 5 |
| Kalamazoo Creek | 10.6 | 11 |
| Kelly Creek | 42.1 | 78 |
| Kern Creek | 14.3 | 14 |
| Kings River | 43.1 | 43 |
| Kittridge Creek | 10.4 | 10 |
| Knoll Creek | 13 | 13 |
| Lake Creek | 40.4 | 40 |
| Lamb Creek | 10.8 | 11 |
| Lamoille Creek | 40.1 | 119 |
| Leonard Creek | 30.6 | 48 |
| Linka Creek | 11.7 | 12 |
| Little Goose Creek | 16.8 | 17 |
| Little Humboldt River | 59.6 | 297 |
| Little Humboldt River - North Fork | 56.1 | 56 |
| Little Humboldt River - South Fork | 42.2 | 108 |
| Little Jack Creek | 13.2 | 13 |
| Little Owyhee River | 44.5 | 174 |
| Long Valley Creek | 19.9 | 30 |
| Loomis Creek | 11.5 | 12 |
| Lousetown Creek | 10.1 | 10 |
| Lynn Creek | 10.6 | 11 |
| Maggie Creek | 58.2 | 124 |
| Mahala Creek | 14.1 | 14 |
| Mahogany Creek | 14.1 | 14 |
| Martin Creek | 52.1 | 63 |
| Marys Creek | 16.6 | 17 |
| Marys River | 93 | 159 |
| Marysville Creek | 10.5 | 11 |
| McDonald Creek | 12.8 | 13 |
| Meadow Creek (Bruneau River tributary) | 13.1 | 13 |
| Meadow Creek (Goose Creek tributary) | 4.7 | 5 |
| Meadow Valley Wash | 138.4 | 218 |
| Milligan Creek | 53.7 | 66 |
| Mitchell Creek | 12.5 | 25 |
| Muddy River | 35.6 | 298 |
| Mullinix Creek | 10.9 | 11 |
| Murry Creek | 12.8 | 31 |
| Nelson Creek | 10.7 | 11 |
| Nickel Creek | 14.4 | 14 |
| North Antelope Creek | 11.6 | 12 |
| Owyhee River | 57.4 | 500 |
| Owyhee River - South Fork | 93.9 | 416 |
| Pahranagat Wash | 44.5 | 45 |
| Peavine Creek | 45.6 | 46 |
| Pete Hanson Creek | 19.2 | 19 |
| Pie Creek | 26 | 96 |
| Pilot Creek | 31 | 31 |
| Pine Creek | 62.6 | 222 |
| Poison Creek | 7.9 | 8 |
| Pole Creek (Sheep Creek (Bruneau River tributary)) | 2.7 | 3 |
| Pole Creek (Tabor Creek tributary) | 13 | 13 |
| Pony Creek | 11.8 | 12 |
| Quinn River | 193.2 | 396 |
| Quinn River - South Fork | 11.3 | 11 |
| Rabbit Creek | 30.9 | 31 |
| Rabbit Creek (Kelly Creek tributary) | 11.4 | 11 |
| Rabbithole Creek | 44 | 44 |
| Rattlesnake Creek | 10.2 | 10 |
| Raven Creek | 24.5 | 25 |
| Red Cow Creek | 12 | 12 |
| Reed Creek | 17 | 17 |
| Reese River | 203.9 | 319 |
| Roberts Creek | 24.6 | 25 |
| Robinson Creek | 18.6 | 31 |
| Robinson Creek - South Fork | 12.3 | 12 |
| Rock Creek (Humboldt River tributary) | 116.2 | 229 |
| Rock Creek (Martin Creek tributary) | 11.2 | 11 |
| Rock Spring Creek | 13.5 | 50 |
| Rodeo Creek | 10.1 | 10 |
| Rough Creek | 15.5 | 38 |
| Salmon Falls Creek | 48.5 | 273 |
| Salmon Falls Creek - North Fork | 18.8 | 29 |
| Salmon Falls Creek - South Fork | 12.1 | 92 |
| Secret Creek | 29.2 | 52 |
| Seventysix Creek | 12 | 12 |
| Sheep Creek (Bruneau River tributary) | 2.3 | 10 |
| Sheep Creek (Humboldt River tributary) | 32.8 | 33 |
| Sheep Creek (Owyhee River - South Fork tributary) | 30.3 | 63 |
| Sheep Creek (Pine Creek tributary) | 12.2 | 12 |
| Sherman Creek | 10 | 10 |
| Shoshone Creek | 13.5 | 24 |
| Silver Creek | 15.2 | 15 |
| Simon Creek | 9.3 | 20 |
| Sixteenmile Creek | 14.8 | 15 |
| Skull Creek | 11.3 | 11 |
| Slough Creek | 26.8 | 87 |
| Smith Creek | 15.5 | 16 |
| Soldier Creek | 22.6 | 23 |
| Spring Branch | 24.7 | 25 |
| Spring Creek | 30.5 | 31 |
| Spring Creek | 45.4 | 45 |
| Spring Creek (Goose Creek tributary) | 11.3 | 11 |
| Spring Creek (Little Humboldt River tributary) | 10.3 | 10 |
| Spring Creek (Marys River tributary) | 13.6 | 14 |
| Spring Creek (Sheep Creek (Owyhee River - South Fork tributary)) | 11.1 | 33 |
| Spring Valley Creek | 53.4 | 64 |
| Squaw Creek | 11.4 | 11 |
| Stag Creek | 12.2 | 12 |
| Starr Creek | 5 | 16 |
| Steamboat Creek | 24.7 | 47 |
| Stephens Creek | 15.9 | 16 |
| Steptoe Creek | 31.8 | 63 |
| Stewart Creek | 10.6 | 11 |
| Stoffer Creek | 11 | 26 |
| Stoneberger Creek | 52 | 52 |
| Stump Creek | 10.9 | 11 |
| Sulphur Creek | 11.8 | 12 |
| Sun Creek | 19.5 | 20 |
| Susie Creek | 36.5 | 53 |
| Tabor Creek | 46.9 | 60 |
| Talbot Creek | 14.3 | 27 |
| T Creek | 23.9 | 36 |
| Tenmile Creek | 18.1 | 69 |
| Thorpe Creek | 13 | 13 |
| Thousand Creek | 21.2 | 57 |
| Thousand Springs Creek | 85.7 | 147 |
| Three Creek | 4.1 | 16 |
| Tierney Creek | 11.6 | 12 |
| Toe Jam Creek | 15.8 | 16 |
| Town Creek | 15.4 | 15 |
| Trout Creek (Bishop Creek tributary) | 14.5 | 15 |
| Trout Creek (Goose Creek tributary) | 8.5 | 9 |
| Trout Creek (Salmon Falls Creek tributary) | 27.2 | 40 |
| Truckee River | 83.1 | 160 |
| Tybo Creek | 13.9 | 14 |
| Virgin Creek | 35.3 | 35 |
| Virgin River | 62.1 | 375 |
| Walker River | 70.4 | 219 |
| Washburn Creek | 24.5 | 25 |
| West Walker River | 41.8 | 42 |
| White River | 137.5 | 138 |
| Willow Creek | 63.1 | 63 |
| Willow Creek (Bruneau River tributary) | 12.1 | 12 |
| Willow Creek (Dorsey Creek (Pie Creek tributary)) | 11.8 | 12 |
| Willow Creek (Dun Glen Creek tributary) | 12.4 | 12 |
| Willow Creek (Humboldt River tributary) | 13 | 13 |
| Willow Creek (Huntington Creek tributary) | 11.6 | 12 |
| Willow Creek (Hunts Creek tributary) | 12.4 | 12 |
| Willow Creek (Little Owyhee River tributary) | 26.6 | 65 |
| Willow Creek (Meadow Valley Wash tributary) | 11.2 | 11 |
| Willow Creek (Milligan Creek tributary) | 12.5 | 13 |
| Willow Creek (Rock Creek tributary) | 35 | 46 |
| Wilson Creek | 10.4 | 10 |
